Class PdbToXMLConverter


  • public class PdbToXMLConverter
    extends java.lang.Object

    A class that converts Protein Data Bank (PDB) to XML that will validate against the biojava:MacromolecularStructure DTD.

    Note this code is experimental and subject to change without notice.

    Copyright © 2000 Cambridge Antibody Technology.

    Primary author -

    • Simon Brocklehurst (CAT)
    Other authors -
    • Tim Dilks (CAT)
    • Colin Hardman (CAT)
    • Stuart Johnston (CAT)
    This code was first released to the biojava.org project, July 2000.
    Version:
    0.1
    Author:
    Cambridge Antibody Technology (CAT)
    See Also:
    BlastLikeSAXParser, SimpleXMLEmitter
    • Constructor Summary

      Constructors 
      Constructor Description
      PdbToXMLConverter​(java.lang.String poInput)
      Creates a new BlastToXMLConverter instance.
    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void convert()  
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • PdbToXMLConverter

        public PdbToXMLConverter​(java.lang.String poInput)
        Creates a new BlastToXMLConverter instance.
    • Method Detail

      • convert

        public void convert()
                     throws java.io.IOException,
                            org.xml.sax.SAXException
        Throws:
        java.io.IOException
        org.xml.sax.SAXException